CDS
| Accession Number | TCMCG016C22181 |
| gbkey | CDS |
| Protein Id | OMO61486.1 |
| Location | join(28156..28485,28576..28761,28874..28975,29081..29230,29448..29627,30347..30444,30532..30666,32180..33209,34097..34276,35476..36486,37706..37888,38001..38249) |
| Organism | Corchorus capsularis |
| locus_tag | CCACVL1_23484 |
Protein
| Length | 1277aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA215142; BioSample:SAMN03290679; |
| db_source | AWWV01013446.1 |
| Definition | Zinc finger, CCCH-type [Corchorus capsularis] |
| Locus_tag | CCACVL1_23484 |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | Zinc finger CCCH domain-containing protein |
| KEGG_TC | - |
| KEGG_Module |
M00387
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko04121 [VIEW IN KEGG] ko04131 [VIEW IN KEGG] |
| KEGG_ko |
ko:K10260
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04120
[VIEW IN KEGG] map04120 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGAAACTAAACGGGCAGCAAGAAGGTATGCTGATGACAGCGTAGAAAGAATTTGTGTGCGACGTACTGGATTAGCTACAAGCGCCAATGTCTACCGTAGAAATTCCAAGCCATACAATGCTATATCTGATAATCAACCAAGGAAGAGCTCCTATCATGGCCCTAAGACTTCATATGTTTCTACTCCGAAGGCTCGCAAGCAAGAGGATAAGGTCTGCACGTACTGGATGTCAGGTCACTGTGCCTTTGGTGATCGATGCCGGTATTTGCATTCATGGTCTTGTGGGGATGGATTCTCGTCGTTGGCAAAGCTGGAGGGGCACAAGAAGGCTGTTAGTGGAATTGTTCTTCCTCTAGGGTCTGACAAGCTCTACTCCAGCAGTAGTGATGGAACTCTCCGGATATGGGACTGCCACTCTGGAAAATGTGCCCGTTTGAGCAATCTTGGTGATGAAGTTGGTTCTGTATATACCGAGGGCCGATGGATGTTCATCGGCATGAAAAATGTTGTCAAGGCATGGAATATTGAAACAGCAGAGGAGTTCAGTCTTAAAGGGCCTGTTGGACAAATATTTTGTATGGTTGTTGCTAAGGATATGATTATTGCTGGTGCACAGAATGGTGCTATTTTTGCATGGAAATGCAGTTCTGAGGTCAATAATCCTTTTCAACTAGTTGGATCCAGGAAGGTCCACTCTCGTGCTGTACTATGTTTAACTGTTGGAGAGAACAAGTTATATTCTGGTTCTGTCGATCACACTATAAGGGTTTGGGACATTGATACGTTACAGTGCATTAAGACTTTAAATGGACACGAAGATGCCGTGATGTCTCTTCTTCACTGTAATGGCTGCTTGTTCTCATGTTCACTGGACTGCAGTACAAAAGTTTGGTTTGCTGCAGAAGGAGAAAATTGGAAAGTCATCTACACCCATAAGGAAGAAAAAGGTGTCCTTGCTCTTTGTGGCATGAATGATGCAGAAAATAAACCAGTTTTGTTCTGCTCCTGCAATGACAAGACTGTTCGCCTATATGATTTACCATCGTTCAGGACAGCGAATTTTGCATTCACTGAGAGAGGCAGGACATTTTCAAAAGAAGAAGTTAGAGTGATTTACCGAGGGCCTTATCCCCTTTTCTTCACAGGAGATGCAAGCGGGTCCTTGACTGTTTGGAAATGGGTTGTTATGGAAGTGATAAAGGATGATAGTGCGGAAAAAAATATTTGTAAAAGGCAAAGGGTTTCCGAGGAAGAACTAGATGACCGCATTAGTAGTCTGCCTGACAATATTCTTGTTCATATCCTTTCTTTTCTGCCGATAAAAGATGCTGTGAAAACGGTTCTTGTCCCTAGATTCAGGAACCTTTGGAACTTTCTTCCTTCACTGTCGTTCAATCAATGTGGTTATCATGACTGTGCCAGTAAATATGATGAAGATGGTCCTCATTACAATGAAAAATTCTTGAATTTCGTCCGCCATGTATTGTTTCTTCATGAGAGTGCTACTATAGACAGGTTCCATCTCAAGTTTGAGCTTAATCTTGATCGCACTAATGAAGCAGCAGCTGATGAGGAGGATGAAGAAGCTCGGGATTATGCCAATAGAGAAACGATGATGGCAAGTGAAGTTGATAGTTGGATCCATTTTGTAATGAGGAAAAAAGTGAAAGTTCTTAATCTTGATTTTAAGGGTTGCGGACTACCAGAGCCCACTGCTTGTTACAGGCTGCCCAATGTTGTTTTCGGAGGTAAATATTTAACAGAGCTGAAGTTGGTTGCTTGTGAGATCAAACCAAGCCACAAGATTCAACTGAATTGCCTGAAACGGTTGTTACTAGAAGAGCTTGTTTTGGAGGATAAGATCATCAATCAAATTTTAAAAGGGTGCTCTCTGCTAGAAGAATTATCTTTGATACGCTGTTATGGTCTTCGCAGATTGGCGACTGATAATCCCAATACTAAGAGTTTGATACTCGATCTTTACTACCATGGTCCGATGCTACAGGTTTTATGTCCCAATGTTGAATCATTGGAAATAGGTGGCTCTATAGACTTGGTGGATTTAGTGGATGTATCTTCTATTGCTGTTTCCGCCGTCGTCTTCAGCAGCACTTTCAAATGCAAGCATGAGAGATATCAGACACTCAAAGCACTTTTTAAGAAGCTTAGTCATGGAAAGATATTCATACCATGCACTTGGTGTATTCTGGTTTTCACCATATGGCAGCTCATATATCAGCCAGGTCTGCTCTTTGTCTGGAAACGTCTAGAATTTGGGATTCATCTGACAAAATGGCACCTTCCCGGAATTTCTTGCTTGCTGAGAACTTCTCCATATTTGGAAACACTTGCCATTTATATTTCCCCTGGACGGTATCACATTTTTACGGTTGTCATGGAAGGAAATGATGATATTGTGGAAACAAATAGTTGTAAAAGACAAAGGGTTTCTGAGGAACAAGTTATTGACCGGATAAGTAGTCTGCCAGATCCTCTTATTGTTCATATCCTTTCATTTCTGCCTACAGAGGATGCTGTAAAAACGGTTCTTATTCGTAGATTTGGTAAACTTTGGACCTTTGTTTCAAGGCTTTCATTTGATCAATGTTCTTATCATGATTGTGCCGATATAGTTTACAGTGATGATGTTGAATATGATGAAAGGTTCTTGGATTTTGTGCATAATGTTCTGATTCTTCATGAGAATCCCACTATTGATCAGTTCATTCTCAAGTTGCATTATAATTCGTTGTGGTGTCCTAGTGAGGAGGGGCCAAATGATAATGTTGATCGAGAAATGAGGATTACAGATCAAGTAAATAGTTGGGTTCATTTTGCAATGAGAAAAAAAGTGGAACTTCTTCATCTTGATTTTAAGGGATGCGGTTTCTTTGAGCCAGATGCTTACATTTTGCCTGATGTTGTAATGAACTGTCAATATTTGACCCAACTGAAGTTGGTTGCCTGTGAAATCATACCAACTGGGCAGATTAAGCTCAACACCCTCAAAAGGTTATTTCTGGAAGAAATAGATCTGAAGGGAGAGATTCTTAATCAGATTTTATGTGGGTCGTCTGTGCTTGAAGAATTATCTTTGGTAAAGTGTTACAGTCTTCATACATTGGCTTTTAAGAACCCCAGCATTAAGAGTTTGATAGTTGAGTTTGAGCCTATGACCAGTTCTCAAAGGTTACAGATTTCATGTCCAAATCTTGTATCATTGCAACTAGCTGGGTTTATAGATTTAATGGATTTAGTGGATGTGTCTTCTCTTGCTGTTTCCTCCATCTTCTTCTCGTTTCATTCCAAATGTGCACTTGTCAGACACCAGGAGATCAGAAGAGTTTTTCAGAAGCTTAGTCGTAGCAAGTTGGTCAGACTGTGTACTTGGTCTATTATGGTATTTACTACATGGCAGCTAAACGGTCTGCAAGATCTATTCTGTCGCTGGAAGTGCCTGGAATTCAGTGTAGTTCTGTCAAAATGGCACCATATGGGGATTTGTTTCTTGCTGAGAAGTTCTCCATATTTGGAGACACTTACCATATACATTGGCCGTGGTTTAGGGCAGCATTTAGTGCAGGTTTTTGAAGAGGAATGGGCTGAATATGATCTTGATATGAGCAAGTTCTGGAGTTCACAGGTGGGCTCTTTCCGTTGTTTACAGTACCACCTAAAAACTATCACGATATATGGTCTCATCACAGAGCCATACATGATTGATTTCATCGAATTTTTGCTCAAGAAAGCTATGGTCTTGGAGAGTTTGGTGATTTCTACTGATACAGTTCTTAAACCACCTCAGCAACCTGAGATTTTTGGTGTCACATAG |
| Protein: METKRAARRYADDSVERICVRRTGLATSANVYRRNSKPYNAISDNQPRKSSYHGPKTSYVSTPKARKQEDKVCTYWMSGHCAFGDRCRYLHSWSCGDGFSSLAKLEGHKKAVSGIVLPLGSDKLYSSSSDGTLRIWDCHSGKCARLSNLGDEVGSVYTEGRWMFIGMKNVVKAWNIETAEEFSLKGPVGQIFCMVVAKDMIIAGAQNGAIFAWKCSSEVNNPFQLVGSRKVHSRAVLCLTVGENKLYSGSVDHTIRVWDIDTLQCIKTLNGHEDAVMSLLHCNGCLFSCSLDCSTKVWFAAEGENWKVIYTHKEEKGVLALCGMNDAENKPVLFCSCNDKTVRLYDLPSFRTANFAFTERGRTFSKEEVRVIYRGPYPLFFTGDASGSLTVWKWVVMEVIKDDSAEKNICKRQRVSEEELDDRISSLPDNILVHILSFLPIKDAVKTVLVPRFRNLWNFLPSLSFNQCGYHDCASKYDEDGPHYNEKFLNFVRHVLFLHESATIDRFHLKFELNLDRTNEAAADEEDEEARDYANRETMMASEVDSWIHFVMRKKVKVLNLDFKGCGLPEPTACYRLPNVVFGGKYLTELKLVACEIKPSHKIQLNCLKRLLLEELVLEDKIINQILKGCSLLEELSLIRCYGLRRLATDNPNTKSLILDLYYHGPMLQVLCPNVESLEIGGSIDLVDLVDVSSIAVSAVVFSSTFKCKHERYQTLKALFKKLSHGKIFIPCTWCILVFTIWQLIYQPGLLFVWKRLEFGIHLTKWHLPGISCLLRTSPYLETLAIYISPGRYHIFTVVMEGNDDIVETNSCKRQRVSEEQVIDRISSLPDPLIVHILSFLPTEDAVKTVLIRRFGKLWTFVSRLSFDQCSYHDCADIVYSDDVEYDERFLDFVHNVLILHENPTIDQFILKLHYNSLWCPSEEGPNDNVDREMRITDQVNSWVHFAMRKKVELLHLDFKGCGFFEPDAYILPDVVMNCQYLTQLKLVACEIIPTGQIKLNTLKRLFLEEIDLKGEILNQILCGSSVLEELSLVKCYSLHTLAFKNPSIKSLIVEFEPMTSSQRLQISCPNLVSLQLAGFIDLMDLVDVSSLAVSSIFFSFHSKCALVRHQEIRRVFQKLSRSKLVRLCTWSIMVFTTWQLNGLQDLFCRWKCLEFSVVLSKWHHMGICFLLRSSPYLETLTIYIGRGLGQHLVQVFEEEWAEYDLDMSKFWSSQVGSFRCLQYHLKTITIYGLITEPYMIDFIEFLLKKAMVLESLVISTDTVLKPPQQPEIFGVT |